That's definitely an odd combination. Are the 'zokes 45mm or 50mm (you'll need to measure the diameter of the fork tube)? Has the entire front-end been changed? It probably has a Brembo front brake and master cylinder which is definitely an upgrade from the stock KDX front brakes.
Certain KTM's, Husky's and GG's (like my '98 EC) came stock with 'zokes. I can't tell you if it's better or worse than the stock KDX (KYB, I think???) forks. Like any other bike you'll need to have the forks sprung for your weight. Changes in the oil weight and height can vary performance some what. The clickers control only a small part of the damping. There are quite a few mods that can be done to the 'zokes to improve performance.
The 'zokes do have some unusual traits. The left leg controls compression and the right leg controls rebound. The sliders are extremely soft therefore frequent oil changes are recommended. The aluminum will wear rapidly, contaminate the fork oil, increase wear on the bushings and eventually the seals will leak. I have seen numerous 'zokes (both 45's and 50's) that just pump oil. To cure this condition I had MX-Tech hard anodize my sliders in March of '01. I did change the oil last winter, but still have the same bushings and seals. My forks have not leaked one drop of oil.