Mikael, call me overly cautious, but I would probably take them apart again, just to make sure everything is how it's supposed to be. Look at it as practice for the next rebuild ;) Following the instructions from MX Tech you should be good to go. :thumb:
Mully, as for your question. I used to follow the bounce/brake routine, but now do it slightly different. I install the front axle, and tighten the axle nut. Then with the axle clamps loose, grab the lower fork leg. You will see you can move it ever so slightly on the axle with just your hand. Wiggle it until it finds it's "natural" location and tighten. This way you know for absolute sure that everthing is free and not binding.