Ok found the instructions on how to put in the baja designs dual sport kit (which is what was on there but not even close to good) for the KDX and found this:
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7. The stock stator on the KDX is good for about 40 watts of lighting output. This is not enough to run the full street lighting system. The stator will have to be rewound and the ground floated for the kit to work properly. If you have not already done so, remove the stator plate by removing the shifter, left mag cover, flywheel, and the two screws which secure the stator plate. Make note of the timing marks on the stator plate and how they are referenced to the timing index on the case so that you can reinstall the stator plate in the same position. You will need a flywheel puller to remove the flywheel.
Once the stator has been rewound, reinstall and run its wiring back up to the front right corner of the airbox.
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Does this mean I need to rewind the stator? Just not sure how to undo this mess.