I proof read what I wrote and thought to myself "surely no-one will assume that I will leave the radiator connected to the coolant OVERFLOW tank"... apparently I was wrong :p.
And even if I did, no matter what it cannot end up in the coolant. Pressure opens the valve to the bottle, negative pressure (when the system cools down) only seals the system tighter, there is no possible way anything can go from the bottle, to the radiator. You have to remember that this bike's cooling system is not like most cars or sports bikes that incorporate a EXPANSION reservoir, the KDX has a closed system with nothing buy a pressure relief.
So basically, I am using the overflow bottle as an overflow for the gearbox and carb, and like I said, by connecting the top pipe to the gearbox and carb, then looping the bottom pipe over the frame and into thin air, unless the bottle somehow fills to the top, there is no possible way of contaminating fluids.